misha: Toolkit for Analysis of Genomic Data

A toolkit for analysis of genomic data. The 'misha' package implements an efficient data structure for storing genomic data, and provides a set of functions for data extraction, manipulation and analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay (2011) <doi:10.1038/ng.947>.

Version: 4.2.9
Depends: R (≥ 3.0.0)
Imports: magrittr, curl
Suggests: dplyr, glue, knitr, readr, rmarkdown, spelling, stats, testthat (≥ 3.0.0), tibble, utils, withr
OS_type: unix
Published: 2024-01-15
Author: Misha Hoichman [aut], Aviezer Lifshitz [aut, cre], Eitan Yaffe [aut], Amos Tanay [aut], Weizmann Institute of Science [cph]
Maintainer: Aviezer Lifshitz <aviezer.lifshitz at weizmann.ac.il>
BugReports: https://github.com/tanaylab/misha/issues
License: MIT + file LICENSE
URL: https://tanaylab.github.io/misha/, https://github.com/tanaylab/misha
NeedsCompilation: yes
Language: en-US
Materials: README NEWS
CRAN checks: misha results

Documentation:

Reference manual: misha.pdf
Vignettes: Genomes
Manual

Downloads:

Package source: misha_4.2.9.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): misha_4.2.9.tgz, r-oldrel (arm64): misha_4.2.9.tgz, r-release (x86_64): misha_4.2.9.tgz
Old sources: misha archive

Linking:

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